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- Sinitsyn and Nemenman, 2007a
- Sinitsyn and Nemenman, 2010
- Sinitsyn et al., 2009
- Smart Thoughts From Smart People
- Smith et al., 2016
- Srivastava et al., 2017
- Stochastic dynamics on biological networks
- Stochastic path integral
- Stochasticity in regulatory networks
- Stromberg et al., 2013
- Tanase-Nicola and Nemenman, 2011
- Tang et al., 2014
- Tchernookov and Nemenman, 2013
- Teuscher et al, 2008
- The Berry phase in stochastic kinetics
- Tools and approximations for stochastic analysis
- Visual neural computation
- Wang et al., 2005
- Wang et al., 2006
- Wang et al., 2007
- Wang et al., 2009
- Wei et al., 2011
- Wiggins and Nemenman, 2003
- Ziv et al., 2007