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  1. Daniels and Nemenman, 2015a
  2. De Ronde et al., 2009
  3. Decoding Spike Trains
  4. Deep Lab Cut: markerless movement analysis made simple
  5. Diagnostics using microarray data
  6. Dresigmeyer et al., 2008
  7. E. coli chemoreceptor: mesoscopic model
  8. Edwards et al., 2007
  9. Ellison et al., 2016
  10. Entropy Estimation
  11. Entropy estimation methods
  12. Establishing causality
  13. FAQ
  14. First q-bio Conference: Employment board
  15. First q-bio Conference: Participants
  16. First q-bio Conference: Program
  17. First q-bio Conference: Program Details
  18. First q-bio Summer School: Classrooms
  19. First q-bio Summer School: Gene Regulation
  20. First q-bio Summer School: Other Topics in Biological Modeling
  21. First q-bio Summer School: Participants
  22. First q-bio Summer School: Program
  23. First q-bio Summer School: School Hotel
  24. First q-bio Summer School: Signal Transduction Mechanisms
  25. First q-bio Summer School: Stochasticity in Biochemistry and Systems Biology
  26. Gintautas et al., 2011
  27. Group Picture 2012
  28. Group Picture 2013
  29. Group Picture 2014
  30. Group Picture 2016
  31. Group seminar / Journal club
  32. Hlavacek et al., 2015
  33. Holmes et al., 2017
  34. Holy and Nemenman, 2002
  35. INemenman
  36. Ilya Nemenman
  37. Individuality in Movement and Locomotion: From equations to interventions
  38. Individuality in risk-tolerance and learning effects in non-steady locomotion of guinea fowl
  39. Information Bottleneck Method
  40. Information processing in biological systems
  41. Installing Octave on your PC and Mac
  42. Issues
  43. Kominis and Nemenman, 1997
  44. Lab Members
  45. Learning, adaptation, and adaptive behaviors
  46. Leung et al., 2016
  47. Levchenko and Nemenman, 2014
  48. Locomotion and Movement Workshop 2020: Posters
  49. Margolin et al., 2004b
  50. Margolin et al., 2006a
  51. Margolin et al., 2006b
  52. Margolin et al., 2010
  53. Merchan and Nemenman, 2015
  54. Michaelis-Menten reaction: pump current and other stochastic effects
  55. Minkevich and Nemenman, 1995a
  56. Minkevich and Nemenman, 1995b
  57. Mugler et al., 2008
  58. Mugler et al., 2009
  59. Mugler et al., 2015
  60. Munsky et al., 2009
  61. Naud et al., 1999
  62. Nemenman, 2004
  63. Nemenman, 2005
  64. Nemenman, 2011b
  65. Nemenman, 2012
  66. Nemenman, 2012a
  67. Nemenman, 2015
  68. Nemenman-filtering
  69. Nemenman and Bialek, 2002
  70. Nemenman and Silbergleit, 1999
  71. Nemenman and Singh, 2015
  72. Nemenman and Wiggins
  73. Nemenman et al.
  74. Nemenman et al., 2002
  75. Nemenman et al., 2004
  76. Nemenman et al., 2007a
  77. Nemenman et al., 2008
  78. Nemenman et al., 2008a
  79. Nemenman et al., 2009
  80. Nemenman et al., 2010
  81. Nemenman et al., 2011
  82. Nemenman et al., 2012
  83. Nemenman et al., 2013
  84. Nemenman et al., 2014
  85. Nemenman et al., 2015
  86. News
  87. Open positions
  88. Otwinowski and Nemenman, 2013
  89. Otwinowski et al., 2011
  90. P53 regulation
  91. Personal Pages
  92. Ph. D. Thesis
  93. Physics 190, 2015: Discussion Leaders
  94. Physics 190, 2015: Freshman Seminar: Where do laws of nature come from?
  95. Physics 190, 2015: Syllabus
  96. Physics 212, 2016: Computational Modeling For Scientists And Engineers
  97. Physics 212, 2016: Syllabus
  98. Physics 212, 2017: Computational Modeling For Scientists And Engineers
  99. Physics 212, 2017: Lab 10
  100. Physics 212, 2017: Lab 12
  101. Physics 212, 2017: Lab 4
  102. Physics 212, 2017: Lab 5: Starting with Project 2
  103. Physics 212, 2017: Lab 7
  104. Physics 212, 2017: Lecture 10
  105. Physics 212, 2017: Lecture 11: Good coding practices
  106. Physics 212, 2017: Lecture 12: More Python: Scopes and all that
  107. Physics 212, 2017: Lecture 13
  108. Physics 212, 2017: Lecture 14
  109. Physics 212, 2017: Lecture 15
  110. Physics 212, 2017: Lecture 18: Introduction to randomness. How are pseudo-random numbers generated?
  111. Physics 212, 2017: Lecture 1 - Introduction
  112. Physics 212, 2017: Lecture 2
  113. Physics 212, 2017: Lecture 23
  114. Physics 212, 2017: Lecture 24
  115. Physics 212, 2017: Lecture 25
  116. Physics 212, 2017: Lecture 3 - The Modeling Process
  117. Physics 212, 2017: Lecture 7
  118. Physics 212, 2017: Lecture 8
  119. Physics 212, 2017: Lecture 9: Errors
  120. Physics 212, 2017: Lectures 5, 6
  121. Physics 212, 2017: Syllabus
  122. Physics 212, 2018: Computational Modeling For Scientists And Engineers
  123. Physics 212, 2018: Lab 11
  124. Physics 212, 2018: Lab 12
  125. Physics 212, 2018: Lecture 1
  126. Physics 212, 2018: Lecture 10
  127. Physics 212, 2018: Lecture 11
  128. Physics 212, 2018: Lecture 12
  129. Physics 212, 2018: Lecture 13
  130. Physics 212, 2018: Lecture 14
  131. Physics 212, 2018: Lecture 15
  132. Physics 212, 2018: Lecture 17
  133. Physics 212, 2018: Lecture 18
  134. Physics 212, 2018: Lecture 19
  135. Physics 212, 2018: Lecture 2
  136. Physics 212, 2018: Lecture 21
  137. Physics 212, 2018: Lecture 22
  138. Physics 212, 2018: Lecture 23
  139. Physics 212, 2018: Lecture 24
  140. Physics 212, 2018: Lecture 25
  141. Physics 212, 2018: Lecture 3
  142. Physics 212, 2018: Lectures 4
  143. Physics 212, 2018: Lectures 6
  144. Physics 212, 2018: Lectures 7
  145. Physics 212, 2018: Lectures 8
  146. Physics 212, 2018: Lectures 9
  147. Physics 212, 2018: Syllabus
  148. Physics 212, 2019: Computational Modeling For Scientists And Engineers
  149. Physics 212, 2019: Lecture 1
  150. Physics 212, 2019: Lecture 10
  151. Physics 212, 2019: Lecture 11
  152. Physics 212, 2019: Lecture 12
  153. Physics 212, 2019: Lecture 13
  154. Physics 212, 2019: Lecture 14
  155. Physics 212, 2019: Lecture 15
  156. Physics 212, 2019: Lecture 16
  157. Physics 212, 2019: Lecture 17
  158. Physics 212, 2019: Lecture 18
  159. Physics 212, 2019: Lecture 19
  160. Physics 212, 2019: Lecture 2
  161. Physics 212, 2019: Lecture 20
  162. Physics 212, 2019: Lecture 22
  163. Physics 212, 2019: Lecture 3
  164. Physics 212, 2019: Lecture 4
  165. Physics 212, 2019: Lecture 5
  166. Physics 212, 2019: Lecture 6
  167. Physics 212, 2019: Lecture 7
  168. Physics 212, 2019: Lecture 8
  169. Physics 212, 2019: Lecture 9
  170. Physics 212, 2019: Syllabus
  171. Physics 212, 2020: Computational Modeling For Scientists And Engineers
  172. Physics 212, 2020: Syllabus
  173. Physics 380, 2010: Basic Probability Theory
  174. Physics 380, 2010: Coding Theorems
  175. Physics 380, 2010: Fourier Analysis
  176. Physics 380, 2010: Information, Gambling, and Population Biology
  177. Physics 380, 2010: Information Processing in Biology
  178. Physics 380, 2010: Information Theory
  179. Physics 380, 2010: Introduction
  180. Physics 380, 2010: Linear Response Theory
  181. Physics 380, 2010: Random Walks
  182. Physics 380, 2011: Block four: Adaptation
  183. Physics 380, 2011: Block one: Biological information processing is probabilistic
  184. Physics 380, 2011: Block three: Dynamical Information Processing
  185. Physics 380, 2011: Block two: Information theory in biological signaling
  186. Physics 380, 2011: Homework 1
  187. Physics 380, 2011: Homework 10
  188. Physics 380, 2011: Homework 2
  189. Physics 380, 2011: Homework 3
  190. Physics 380, 2011: Homework 4
  191. Physics 380, 2011: Homework 5
  192. Physics 380, 2011: Homework 6
  193. Physics 380, 2011: Homework 7
  194. Physics 380, 2011: Homework 8
  195. Physics 380, 2011: Homework 9
  196. Physics 380, 2011: Information Processing in Biology
  197. Physics 380, 2011: Lecture 1
  198. Physics 380, 2011: Lecture 10
  199. Physics 380, 2011: Lecture 11
  200. Physics 380, 2011: Lecture 12
  201. Physics 380, 2011: Lecture 13
  202. Physics 380, 2011: Lecture 14
  203. Physics 380, 2011: Lecture 15
  204. Physics 380, 2011: Lecture 16
  205. Physics 380, 2011: Lecture 17
  206. Physics 380, 2011: Lecture 18
  207. Physics 380, 2011: Lecture 19
  208. Physics 380, 2011: Lecture 2
  209. Physics 380, 2011: Lecture 21
  210. Physics 380, 2011: Lecture 22
  211. Physics 380, 2011: Lecture 23
  212. Physics 380, 2011: Lecture 24
  213. Physics 380, 2011: Lecture 25
  214. Physics 380, 2011: Lecture 26
  215. Physics 380, 2011: Lecture 27
  216. Physics 380, 2011: Lecture 3
  217. Physics 380, 2011: Lecture 4
  218. Physics 380, 2011: Lecture 5
  219. Physics 380, 2011: Lecture 6
  220. Physics 380, 2011: Lecture 7
  221. Physics 380, 2011: Lecture 8
  222. Physics 380, 2011: Lecture 9
  223. Physics 380, 2012: Homework 11
  224. Physics 380, 2012: Homework 12
  225. Physics 434, 2012: Block one: Biological information processing is probabilistic
  226. Physics 434, 2012: Block three: Dynamical Information Processing
  227. Physics 434, 2012: Block two: Information theory in biological signaling
  228. Physics 434, 2012: Homework 1
  229. Physics 434, 2012: Homework 10
  230. Physics 434, 2012: Homework 2
  231. Physics 434, 2012: Homework 3
  232. Physics 434, 2012: Homework 4
  233. Physics 434, 2012: Homework 5
  234. Physics 434, 2012: Homework 6
  235. Physics 434, 2012: Homework 7
  236. Physics 434, 2012: Homework 8
  237. Physics 434, 2012: Homework 9
  238. Physics 434, 2012: Information Processing in Biology
  239. Physics 434, 2012: Lecture 1
  240. Physics 434, 2012: Lecture 10
  241. Physics 434, 2012: Lecture 14
  242. Physics 434, 2012: Lecture 15
  243. Physics 434, 2012: Lecture 16
  244. Physics 434, 2012: Lecture 17
  245. Physics 434, 2012: Lecture 20
  246. Physics 434, 2012: Lecture 4
  247. Physics 434, 2012: Lecture 5
  248. Physics 434, 2012: Lecture 6
  249. Physics 434, 2012: Lecture 7
  250. Physics 434, 2012: Lectures 10-11

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